I spoke to Jorgen about this, and all that has been said about the trigger is correct. This engine works extremely well with batch injection, you can set it to fire sequentially for fine fuel control without any HC issues. Also Jorgen tells me that this engine needs a lot of spark energy so keeping the distributor is the best bet.
As for running a boost tube, I tend to use copper brake pipe for the long run through the engine bay and fire wall, and shorter lengths of silicone tube to connect the manifold and the VEMS to the brake pipe.