It can be a case of IAT/MAT compensation, the MAT/TPS table is at work. Depending on sensor calibration and engine, the curve might hit/miss a bit when circumstances change.
If we look at actual VE changes, which also can have this affect, consider this :
On cruise, an air leak in the plenum (= more throttle opening) or intake pipes (no real change) doesn't really do anything to affect the VE of the engine.
A boost leak would cause more exhaust back pressure (turbine working overtime) and can and will change the VE more or less depending on the engine (cam, valve overlap, etc).