I think you may have been bitten by the same little feature, but I am quite sure it has been fixed after I made the firmware developers aware of it 5-6 months ago. The fuel pump relay control settings tell you how long to power on the pump without a trigger signal, and how soon to turn it off after loosing the signal. The last one must NOT be set to 0, make it at least 0.5 seconds. Having it set to 0 may have the appearance of loosing the trigger signal or not having it at all, guess where I spent my time looking for this issue... like I said, it should be fixed but I can't find the info in the firmware changes in the Wiki. Fix that setting to begin with and then we'll see if you get an rpm signal going, if not then we'll have to dig deeper.
Other things I noticed:
- Under secondary trigger settings, make the minimum acceptable angle = 0.
- Disable EGO correction at first. Tune the VE table roughly without it. I generally do all tuning open loop (EGO off).
- Your coolant temp sensor (CLT) is not connected, -40 C is a tell-tale sign.
You've probably been grinding the engine a bit, be aware that dipping below 10 Volts normally indicate that you need a better battery or larger dimension cables to the starter motor.